miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|190448888|gb|FG849218.1|FG849218 TTTTTTTTTTTTTTTTTATACTAAGTTGTTGACATATAAGTGAGGATATATAATAATAATGGTCATGGATCAGTTCAATT
AATGCTGCTAAAAAAGTAGCATATTCAAATGATTAATCATACAAATATTGCATATACATCGAAACATAGAGCATTAGTAC
GTGCCACCATCTTAATTAAGCTAATTAACGAAAATAAAGAAAACTAAGCTTGATTTTCCATGAATTATGAAGTCTTCTAA
TAATTAAGGGCTAGCAAATACTATTGTGAGAGCTAGCTAGCACACATTTTATTCAGGAATGAAGTATAGCATCATGAGCA
ATCAGCCTTAGATTTTTTTTTAGCAGATTGACTGCTCATGATGTTATATCATTTCCATGAATTTACCTCTTTGCATGCTA
CCATATATTTTTATATATGTATATGCTGCCCTAATTGTAAACTTGTCCTAACGAAAGCCCCCTCCGAGGGCAGGTGCCCA
ATAGTCTGCTCCATTGTCACTCCCAACTTGCAGTGTGCATGACACTGGAACCAGACACAACCCTCTACTCCTCAGCCCCT
TCTTTTGTTCTTCTTCAGTTTCCGGTTCTCCAGCTGCTTTCCTTTTCAAGCTGTTCTCATTATTCAGCAGCTGACCAGGG
TCTTCAGGGAATATACAATTCTTCTCTCCTTGAACAGAATTCTGCTGCCTCCCACTCCCTGGGTCACCGCTCAAGTATGG




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  112 bits (279), Expect = 3e-24
 Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 5/84 (5%)
 Frame = -1

Query: 699 GSGRQQNSVQGEKNCIFPEDPGQLLNNENSLKRKAAGEPETE-----EEQKKGLRSRGLC 535
           G+ R Q  +QG+++CIFPEDPGQL+N++  +KR+ A    T+     EE KK LRSRGLC
Sbjct: 320 GNMRHQQHLQGDRSCIFPEDPGQLVNDQ-CMKRRGASSSSTDNQNASEEPKKDLRSRGLC 378

Query: 534 LVPVSCTLQVGSDNGADYWAPALG 463
           LVP+SCTLQVGSDNGADYWAPALG
Sbjct: 379 LVPISCTLQVGSDNGADYWAPALG 402